Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.48□□□□□ -0.25
Sox6P40645 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.48□□□□□ -0.25
Sox6P40645 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox6P40645 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox6P40645 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 AW822252-206ENSMUST00000208904 237 ntBASIC13.48□□□□□ -0.25
Sox6P40645 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.48□□□□□ -0.25
Sox6P40645 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox6P40645 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox6P40645 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.47□□□□□ -0.25
Sox6P40645 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.47□□□□□ -0.25
Sox6P40645 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox6P40645 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Celf4-206ENSMUST00000224553 1729 ntBASIC13.47□□□□□ -0.25
Sox6P40645 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox6P40645 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox6P40645 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Sox6P40645 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Sox6P40645 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox6P40645 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Sox6P40645 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.46□□□□□ -0.25
Sox6P40645 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Sox6P40645 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox6P40645 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox6P40645 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms