Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC174678.1-201ENSMUST00000228007 2749 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Chd1P40201 Gm12363-201ENSMUST00000122250 668 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Gm8099-201ENSMUST00000200510 742 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Gm17330-201ENSMUST00000221047 165 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC21.15■□□□□ 0.98
Chd1P40201 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Gm14277-201ENSMUST00000121195 360 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Chd1P40201 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC21.15■□□□□ 0.98
Chd1P40201 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC21.15■□□□□ 0.98
Chd1P40201 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chd1P40201 Gm5869-201ENSMUST00000200248 1257 ntBASIC21.15■□□□□ 0.98
Chd1P40201 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC21.15■□□□□ 0.98
Chd1P40201 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1P40201 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Chd1P40201 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC21.15■□□□□ 0.98
Chd1P40201 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Chd1P40201 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chd1P40201 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd1P40201 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1P40201 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1P40201 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1P40201 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Chd1P40201 Mospd4-201ENSMUST00000180618 576 ntBASIC21.14■□□□□ 0.97
Chd1P40201 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC21.14■□□□□ 0.97
Chd1P40201 Gm5896-201ENSMUST00000189662 1024 ntBASIC21.14■□□□□ 0.97
Chd1P40201 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Chd1P40201 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.14■□□□□ 0.97
Chd1P40201 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Chd1P40201 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chd1P40201 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chd1P40201 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Chd1P40201 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1P40201 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Chd1P40201 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chd1P40201 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC21.12■□□□□ 0.97
Chd1P40201 Gm13665-201ENSMUST00000120830 528 ntBASIC21.12■□□□□ 0.97
Chd1P40201 Gm2445-201ENSMUST00000182798 989 ntBASIC21.12■□□□□ 0.97
Chd1P40201 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC21.12■□□□□ 0.97
Chd1P40201 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Chd1P40201 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd1P40201 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Gm14451-201ENSMUST00000121581 1542 ntBASIC21.12■□□□□ 0.97
Chd1P40201 AC123857.2-201ENSMUST00000225756 1582 ntBASIC21.12■□□□□ 0.97
Chd1P40201 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.12■□□□□ 0.97
Chd1P40201 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Chd1P40201 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC21.12■□□□□ 0.97
Chd1P40201 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC21.12■□□□□ 0.97
Chd1P40201 AC153974.2-201ENSMUST00000218577 1025 ntBASIC21.12■□□□□ 0.97
Chd1P40201 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC21.12■□□□□ 0.97
Chd1P40201 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1P40201 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.11■□□□□ 0.97
Chd1P40201 Gm23200-201ENSMUST00000104379 132 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms