Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.33□□□□□ -0.6
Rom1P32958 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.33□□□□□ -0.6
Rom1P32958 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rom1P32958 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rom1P32958 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rom1P32958 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rom1P32958 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rom1P32958 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Gm2451-201ENSMUST00000199447 999 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Gm10290-201ENSMUST00000200451 999 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.32□□□□□ -0.6
Rom1P32958 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rom1P32958 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rom1P32958 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Rom1P32958 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.32□□□□□ -0.6
Rom1P32958 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rom1P32958 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.32□□□□□ -0.6
Rom1P32958 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.32□□□□□ -0.6
Rom1P32958 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.32□□□□□ -0.6
Rom1P32958 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.32□□□□□ -0.6
Rom1P32958 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rom1P32958 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Rom1P32958 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Rom1P32958 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.31□□□□□ -0.6
Rom1P32958 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rom1P32958 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rom1P32958 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.31□□□□□ -0.6
Rom1P32958 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms