Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Krt1P04104 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Krt1P04104 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Krt1P04104 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Krt1P04104 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Krt1P04104 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.54□□□□□ -0.24
Krt1P04104 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Krt1P04104 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Krt1P04104 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Krt1P04104 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Krt1P04104 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt1P04104 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt1P04104 Gm8584-201ENSMUST00000171982 758 ntBASIC13.54□□□□□ -0.24
Krt1P04104 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt1P04104 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt1P04104 Gm43799-201ENSMUST00000201845 579 ntBASIC13.54□□□□□ -0.24
Krt1P04104 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt1P04104 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Krt1P04104 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt1P04104 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt1P04104 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.53□□□□□ -0.24
Krt1P04104 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.53□□□□□ -0.24
Krt1P04104 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt1P04104 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt1P04104 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.52□□□□□ -0.24
Krt1P04104 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt1P04104 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt1P04104 Gm10013-201ENSMUST00000106074 672 ntBASIC13.52□□□□□ -0.25
Krt1P04104 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Krt1P04104 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt1P04104 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms