Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hcn3O88705 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hcn3O88705 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hcn3O88705 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.74□□□□□ -0.21
Hcn3O88705 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hcn3O88705 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hcn3O88705 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.73□□□□□ -0.21
Hcn3O88705 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hcn3O88705 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hcn3O88705 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gm10060-201ENSMUST00000212002 111 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Mzt1-203ENSMUST00000227948 952 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.73□□□□□ -0.21
Hcn3O88705 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.73□□□□□ -0.21
Hcn3O88705 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hcn3O88705 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hcn3O88705 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Hcn3O88705 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.72□□□□□ -0.21
Hcn3O88705 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.72□□□□□ -0.21
Hcn3O88705 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.72□□□□□ -0.21
Hcn3O88705 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hcn3O88705 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hcn3O88705 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.72□□□□□ -0.21
Hcn3O88705 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hcn3O88705 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Hcn3O88705 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hcn3O88705 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Hcn3O88705 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Hcn3O88705 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hcn3O88705 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.71□□□□□ -0.21
Hcn3O88705 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Gm7222-201ENSMUST00000117512 906 ntBASIC13.71□□□□□ -0.21
Hcn3O88705 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.71□□□□□ -0.21
Hcn3O88705 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hcn3O88705 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hcn3O88705 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms