Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ebf3O08791 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ebf3O08791 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Gm13464-201ENSMUST00000119418 935 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ebf3O08791 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.9□□□□□ -0.02
Ebf3O08791 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ebf3O08791 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Gm7653-201ENSMUST00000214567 508 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Gm46209-201ENSMUST00000217912 553 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Gm6218-201ENSMUST00000219812 628 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ebf3O08791 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.9□□□□□ -0.02
Ebf3O08791 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ebf3O08791 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ebf3O08791 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Gm24694-201ENSMUST00000180054 110 ntBASIC14.89□□□□□ -0.03
Ebf3O08791 Gm27663-201ENSMUST00000184839 110 ntBASIC14.89□□□□□ -0.03
Ebf3O08791 Gm29667-201ENSMUST00000190817 490 ntBASIC14.89□□□□□ -0.03
Ebf3O08791 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.89□□□□□ -0.03
Ebf3O08791 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.89□□□□□ -0.03
Ebf3O08791 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Ebf3O08791 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Ebf3O08791 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ebf3O08791 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf3O08791 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Ebf3O08791 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.88□□□□□ -0.03
Ebf3O08791 Gm12859-201ENSMUST00000117834 427 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ebf3O08791 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ebf3O08791 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Gm29310-201ENSMUST00000185468 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21825-201ENSMUST00000185728 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm29109-201ENSMUST00000185895 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21896-201ENSMUST00000186520 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21873-201ENSMUST00000186728 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21794-201ENSMUST00000187056 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21880-201ENSMUST00000187275 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21826-201ENSMUST00000187451 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21198-201ENSMUST00000188393 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21749-201ENSMUST00000189343 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21901-201ENSMUST00000189568 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm29424-201ENSMUST00000189716 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm28599-201ENSMUST00000189838 694 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21867-201ENSMUST00000189917 696 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms