Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Gm6916-202ENSMUST00000205523 195 ntBASIC14.28□□□□□ -0.12
Gm3139J3QK78 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3139J3QK78 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Gm3139J3QK78 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3139J3QK78 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.27□□□□□ -0.13
Gm3139J3QK78 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gm3139J3QK78 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.26□□□□□ -0.13
Gm3139J3QK78 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.26□□□□□ -0.13
Gm3139J3QK78 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm33320-201ENSMUST00000192232 530 ntBASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm43703-201ENSMUST00000200523 763 ntBASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm44608-201ENSMUST00000206827 855 ntBASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Gm3139J3QK78 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.25□□□□□ -0.13
Gm3139J3QK78 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gm27838-201ENSMUST00000184829 128 ntBASIC14.25□□□□□ -0.13
Gm3139J3QK78 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.25□□□□□ -0.13
Gm3139J3QK78 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms