Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gm7370-201ENSMUST00000219471 767 ntBASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim55G3X8Y1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm10819-201ENSMUST00000099988 561 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Pck2-205ENSMUST00000226352 2784 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim55G3X8Y1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms