Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.41□□□□□ -0.1
Gm28043E0CXC2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Gm13597-201ENSMUST00000121239 375 ntBASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28043E0CXC2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Gm9727-201ENSMUST00000161387 555 ntBASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Gm6443-201ENSMUST00000203599 874 ntBASIC14.39□□□□□ -0.11
Gm28043E0CXC2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.39□□□□□ -0.11
Gm28043E0CXC2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
Gm28043E0CXC2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28043E0CXC2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28043E0CXC2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Gm28043E0CXC2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.38□□□□□ -0.11
Gm28043E0CXC2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Gm28043E0CXC2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms