Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC19.8■□□□□ 0.76
Hfm1D3Z4R1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Gm13342-201ENSMUST00000121055 207 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Gm37259-201ENSMUST00000193903 849 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Gm37008-201ENSMUST00000195712 319 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Gm42550-201ENSMUST00000201553 960 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Gm5620-201ENSMUST00000077991 1348 ntBASIC19.79■□□□□ 0.76
Hfm1D3Z4R1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Gm26927-201ENSMUST00000182385 965 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Gm42929-201ENSMUST00000198374 1286 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Snora73a-201ENSMUST00000082453 205 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hfm1D3Z4R1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Gm26083-201ENSMUST00000157904 193 ntBASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hfm1D3Z4R1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hfm1D3Z4R1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.77■□□□□ 0.75
Hfm1D3Z4R1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hfm1D3Z4R1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms