Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Gm38241-201ENSMUST00000192641 898 ntBASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Gm3961-201ENSMUST00000204425 994 ntBASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col4a6B1AVK5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.46□□□□□ -0.09
Col4a6B1AVK5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.46□□□□□ -0.09
Col4a6B1AVK5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.46□□□□□ -0.09
Col4a6B1AVK5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm11793-201ENSMUST00000120433 981 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.46□□□□□ -0.1
Col4a6B1AVK5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm15770-201ENSMUST00000117498 584 ntBASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.45□□□□□ -0.1
Col4a6B1AVK5 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Mir686-201ENSMUST00000102174 109 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Gm43758-201ENSMUST00000199500 367 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a6B1AVK5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms