Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Gm27301-201ENSMUST00000184012 127 ntBASIC11.76□□□□□ -0.53
Trav18A0A075B656 Gm9182-201ENSMUST00000217829 639 ntBASIC11.76□□□□□ -0.53
Trav18A0A075B656 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.76□□□□□ -0.53
Trav18A0A075B656 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav18A0A075B656 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Acot6-202ENSMUST00000222921 3622 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm37230-201ENSMUST00000194491 818 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gm45098-201ENSMUST00000207179 657 ntBASIC11.75□□□□□ -0.53
Trav18A0A075B656 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav18A0A075B656 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav18A0A075B656 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms