Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb2S4R1M3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb2S4R1M3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.36□□□□□ -0.11
H2afb2S4R1M3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.36□□□□□ -0.11
H2afb2S4R1M3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.36□□□□□ -0.11
H2afb2S4R1M3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb2S4R1M3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.35□□□□□ -0.11
H2afb2S4R1M3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb2S4R1M3 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms