Protein–RNA interactions for Protein: Q9WUZ7

Sh3bgr, SH3 domain-binding glutamic acid-rich protein, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bgrQ9WUZ7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm28033-201ENSMUST00000184224 96 ntBASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Ank2-226ENSMUST00000189368 339 ntBASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Birc2-201ENSMUST00000054878 378 ntBASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Rps4l-201ENSMUST00000071745 943 ntBASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3bgrQ9WUZ7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm27459-201ENSMUST00000184860 107 ntBASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3bgrQ9WUZ7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm2451-201ENSMUST00000199447 999 ntBASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm10290-201ENSMUST00000200451 999 ntBASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm34391-201ENSMUST00000203706 907 ntBASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3bgrQ9WUZ7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3bgrQ9WUZ7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3bgrQ9WUZ7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms