Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn8aQ9WTU3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn8aQ9WTU3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn8aQ9WTU3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn8aQ9WTU3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms