Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco4Q9JIS3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco4Q9JIS3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Timm23-208ENSMUST00000226683 750 ntBASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms