Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm16026-204ENSMUST00000162652 683 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm8584-201ENSMUST00000171982 758 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnft1Q9DCN7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnft1Q9DCN7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Gm9103-201ENSMUST00000119371 405 ntBASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnft1Q9DCN7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms