Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Mir449b-201ENSMUST00000104833 80 ntBASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Gm25948-201ENSMUST00000175334 112 ntBASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Gm9824-201ENSMUST00000178707 561 ntBASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2aQ9DB34 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22065-201ENSMUST00000103753 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22066-201ENSMUST00000103761 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24932-201ENSMUST00000103763 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24115-201ENSMUST00000103799 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22190-201ENSMUST00000103827 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22191-201ENSMUST00000103831 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25287-201ENSMUST00000103846 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24721-201ENSMUST00000103849 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22918-201ENSMUST00000103855 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm28018-201ENSMUST00000103869 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm26399-201ENSMUST00000103937 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25349-201ENSMUST00000177728 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm23616-201ENSMUST00000177797 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25871-201ENSMUST00000177816 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24752-201ENSMUST00000178240 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24496-201ENSMUST00000178287 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25649-201ENSMUST00000178476 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25548-201ENSMUST00000178681 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm23147-201ENSMUST00000178841 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm26095-201ENSMUST00000179270 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22171-201ENSMUST00000179283 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm23936-201ENSMUST00000179354 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm22619-201ENSMUST00000179516 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25255-201ENSMUST00000179579 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24755-201ENSMUST00000179691 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm26506-201ENSMUST00000179692 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm25086-201ENSMUST00000179931 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm23243-201ENSMUST00000180047 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24659-201ENSMUST00000180212 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm24169-201ENSMUST00000180244 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm23689-201ENSMUST00000180354 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm27359-201ENSMUST00000184153 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm27785-201ENSMUST00000184268 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm27466-201ENSMUST00000184396 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm27703-201ENSMUST00000184836 110 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 Gm10253-201ENSMUST00000194270 940 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.98□□□□□ -0.01
Chmp2aQ9DB34 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms