Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Gm12882-201ENSMUST00000121696 517 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Gm23547-201ENSMUST00000158210 271 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Mir8102-201ENSMUST00000184148 139 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.87■□□□□ 0.61
U2af1Q9D883 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.87■□□□□ 0.61
U2af1Q9D883 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.87■□□□□ 0.61
U2af1Q9D883 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.86■□□□□ 0.61
U2af1Q9D883 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.86■□□□□ 0.61
U2af1Q9D883 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
U2af1Q9D883 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.86■□□□□ 0.61
U2af1Q9D883 Gm43703-201ENSMUST00000200523 763 ntBASIC18.86■□□□□ 0.61
U2af1Q9D883 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1Q9D883 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
U2af1Q9D883 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
U2af1Q9D883 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
U2af1Q9D883 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Gm15487-201ENSMUST00000122373 465 ntBASIC18.85■□□□□ 0.61
U2af1Q9D883 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.85■□□□□ 0.61
U2af1Q9D883 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
U2af1Q9D883 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
U2af1Q9D883 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
U2af1Q9D883 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2af1Q9D883 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.84■□□□□ 0.61
U2af1Q9D883 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.84■□□□□ 0.61
U2af1Q9D883 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.84■□□□□ 0.61
U2af1Q9D883 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
U2af1Q9D883 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2af1Q9D883 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms