Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm9726-201ENSMUST00000180321 678 ntBASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gm5682-201ENSMUST00000173402 505 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1bQ9D0N7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gm17807-201ENSMUST00000186869 298 ntBASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1bQ9D0N7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1bQ9D0N7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms