Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.8□□□□□ -0.04
Snf8Q9CZ28 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Gm16026-204ENSMUST00000162652 683 ntBASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.79□□□□□ -0.04
Snf8Q9CZ28 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snf8Q9CZ28 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm13036-201ENSMUST00000117799 748 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm8584-201ENSMUST00000171982 758 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm27300-201ENSMUST00000184085 97 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm27335-201ENSMUST00000184758 97 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Gm10060-201ENSMUST00000212002 111 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snf8Q9CZ28 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snf8Q9CZ28 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snf8Q9CZ28 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.77□□□□□ -0.05
Snf8Q9CZ28 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.77□□□□□ -0.05
Snf8Q9CZ28 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snf8Q9CZ28 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms