Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Gm21769-201ENSMUST00000211922 111 ntBASIC14.34□□□□□ -0.11
Cdh23Q99PF4 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Mir433-201ENSMUST00000093564 124 ntBASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Gm12485-201ENSMUST00000119641 291 ntBASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh23Q99PF4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm14381-201ENSMUST00000122105 414 ntBASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh23Q99PF4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh23Q99PF4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.32□□□□□ -0.12
Cdh23Q99PF4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh23Q99PF4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh23Q99PF4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms