Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim3Q99PE5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm15794-201ENSMUST00000120182 631 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm9013-201ENSMUST00000132939 882 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Rprl3-201ENSMUST00000157400 290 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.24□□□□□ -0.45
Smim3Q99PE5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim3Q99PE5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smim3Q99PE5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
Smim3Q99PE5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Smim3Q99PE5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim3Q99PE5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms