Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm28630-201ENSMUST00000187806 498 ntBASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha9Q91Y11 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha9Q91Y11 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Gm15957-201ENSMUST00000118893 974 ntBASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha9Q91Y11 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha9Q91Y11 Gm8410-201ENSMUST00000117225 605 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms