Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim29Q8R2Q0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm2810-201ENSMUST00000118681 990 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm11745-201ENSMUST00000121669 448 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm25911-201ENSMUST00000157621 56 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm2213-201ENSMUST00000197485 688 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim29Q8R2Q0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gm11594-201ENSMUST00000122313 162 ntBASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gm38225-201ENSMUST00000194001 393 ntBASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim29Q8R2Q0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim29Q8R2Q0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim29Q8R2Q0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms