Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Rftn2Q8CHX7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm21854-201ENSMUST00000179901 471 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm4804-201ENSMUST00000182234 999 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm21470-201ENSMUST00000187680 696 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rftn2Q8CHX7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rftn2Q8CHX7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rftn2Q8CHX7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rftn2Q8CHX7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.21■□□□□ 0.02
Rftn2Q8CHX7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rftn2Q8CHX7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rftn2Q8CHX7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rftn2Q8CHX7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms