Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.81□□□□□ -0.36
ShfQ8CG80 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ShfQ8CG80 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gm9385-201ENSMUST00000117563 472 ntBASIC12.8□□□□□ -0.36
ShfQ8CG80 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.8□□□□□ -0.36
ShfQ8CG80 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.8□□□□□ -0.36
ShfQ8CG80 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.8□□□□□ -0.36
ShfQ8CG80 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ShfQ8CG80 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.8□□□□□ -0.36
ShfQ8CG80 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ShfQ8CG80 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ShfQ8CG80 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.79□□□□□ -0.36
ShfQ8CG80 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ShfQ8CG80 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.79□□□□□ -0.36
ShfQ8CG80 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.79□□□□□ -0.36
ShfQ8CG80 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ShfQ8CG80 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ShfQ8CG80 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ShfQ8CG80 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ShfQ8CG80 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ShfQ8CG80 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms