Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx1Q8C8B0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gm10576-201ENSMUST00000191927 825 ntBASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.72■□□□□ 0.27
Alx1Q8C8B0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Gm4875-201ENSMUST00000118257 786 ntBASIC16.71■□□□□ 0.27
Alx1Q8C8B0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Gm15487-201ENSMUST00000122373 465 ntBASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alx1Q8C8B0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Alx1Q8C8B0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Alx1Q8C8B0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm12585-201ENSMUST00000117307 290 ntBASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Alx1Q8C8B0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms