Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm37230-201ENSMUST00000194491 818 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm13216-201ENSMUST00000117145 591 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm15429-201ENSMUST00000151268 798 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm8227-201ENSMUST00000223306 571 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm14017-201ENSMUST00000121934 386 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm45219-201ENSMUST00000205602 465 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm45186-201ENSMUST00000206874 478 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd9Q8BYH8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm22331-201ENSMUST00000158066 136 ntBASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd9Q8BYH8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms