Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22065-201ENSMUST00000103753 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22066-201ENSMUST00000103761 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24932-201ENSMUST00000103763 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24115-201ENSMUST00000103799 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22190-201ENSMUST00000103827 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22191-201ENSMUST00000103831 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24721-201ENSMUST00000103849 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm28018-201ENSMUST00000103869 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm26399-201ENSMUST00000103937 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm13015-201ENSMUST00000118674 204 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25349-201ENSMUST00000177728 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm23616-201ENSMUST00000177797 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25871-201ENSMUST00000177816 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24752-201ENSMUST00000178240 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24496-201ENSMUST00000178287 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25649-201ENSMUST00000178476 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25548-201ENSMUST00000178681 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm23147-201ENSMUST00000178841 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm26095-201ENSMUST00000179270 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22171-201ENSMUST00000179283 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm23936-201ENSMUST00000179354 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm22619-201ENSMUST00000179516 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25255-201ENSMUST00000179579 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24755-201ENSMUST00000179691 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm26506-201ENSMUST00000179692 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm25086-201ENSMUST00000179931 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm23243-201ENSMUST00000180047 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24659-201ENSMUST00000180212 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm24169-201ENSMUST00000180244 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm23689-201ENSMUST00000180354 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm27359-201ENSMUST00000184153 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm27785-201ENSMUST00000184268 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm27466-201ENSMUST00000184396 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm27703-201ENSMUST00000184836 110 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm5779-201ENSMUST00000218467 910 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Ubp1Q811S7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
Ubp1Q811S7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubp1Q811S7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.16□□□□□ -0.14
Ubp1Q811S7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Mir449b-201ENSMUST00000104833 80 ntBASIC14.16□□□□□ -0.14
Ubp1Q811S7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Gm9824-201ENSMUST00000178707 561 ntBASIC14.16□□□□□ -0.14
Ubp1Q811S7 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.16□□□□□ -0.14
Ubp1Q811S7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubp1Q811S7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms