Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim50Q810I2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim50Q810I2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim50Q810I2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim50Q810I2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14□□□□□ -0.17
Trim50Q810I2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Mir6990-201ENSMUST00000183724 91 ntBASIC14□□□□□ -0.17
Trim50Q810I2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14□□□□□ -0.17
Trim50Q810I2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14□□□□□ -0.17
Trim50Q810I2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim50Q810I2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14□□□□□ -0.17
Trim50Q810I2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim50Q810I2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14□□□□□ -0.17
Trim50Q810I2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim50Q810I2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14□□□□□ -0.17
Trim50Q810I2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14□□□□□ -0.17
Trim50Q810I2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim50Q810I2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim50Q810I2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trim50Q810I2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim50Q810I2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim50Q810I2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim50Q810I2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim50Q810I2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim50Q810I2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim50Q810I2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms