Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.72□□□□□ -0.21
Vrk1Q80X41 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.72□□□□□ -0.21
Vrk1Q80X41 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vrk1Q80X41 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm9522-201ENSMUST00000182394 926 ntBASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm42612-201ENSMUST00000197986 623 ntBASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm43170-201ENSMUST00000199827 612 ntBASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.71□□□□□ -0.21
Vrk1Q80X41 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Mir125a-201ENSMUST00000083545 68 ntBASIC13.71□□□□□ -0.21
Vrk1Q80X41 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vrk1Q80X41 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vrk1Q80X41 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Gm22189-201ENSMUST00000103822 86 ntBASIC13.7□□□□□ -0.22
Vrk1Q80X41 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Gm14042-201ENSMUST00000120139 833 ntBASIC13.7□□□□□ -0.22
Vrk1Q80X41 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Gm6745-201ENSMUST00000199216 526 ntBASIC13.7□□□□□ -0.22
Vrk1Q80X41 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.7□□□□□ -0.22
Vrk1Q80X41 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.7□□□□□ -0.22
Vrk1Q80X41 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vrk1Q80X41 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms