Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.27□□□□□ -0.28
Pif1Q80SX8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Pif1Q80SX8 BC037039-201ENSMUST00000192003 2205 ntBASIC13.27□□□□□ -0.28
Pif1Q80SX8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pif1Q80SX8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm2451-201ENSMUST00000199447 999 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm10290-201ENSMUST00000200451 999 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.27□□□□□ -0.29
Pif1Q80SX8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pif1Q80SX8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.26□□□□□ -0.29
Pif1Q80SX8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.26□□□□□ -0.29
Pif1Q80SX8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.26□□□□□ -0.29
Pif1Q80SX8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pif1Q80SX8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pif1Q80SX8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms