Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh8Q7TSK3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Gm27680-201ENSMUST00000184192 160 ntBASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Shd-206ENSMUST00000225145 998 ntBASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh8Q7TSK3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh8Q7TSK3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms