Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm43347-201ENSMUST00000200226 580 ntBASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm9182-201ENSMUST00000217829 639 ntBASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.17□□□□□ -0.14
Scaf4Q6PFF0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Gm37230-201ENSMUST00000194491 818 ntBASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Gm34391-201ENSMUST00000203706 907 ntBASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Birc2-201ENSMUST00000054878 378 ntBASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf4Q6PFF0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf4Q6PFF0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms