Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm27839-201ENSMUST00000184242 106 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Gm9899-201ENSMUST00000065519 555 ntBASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup98Q6PFD9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nup98Q6PFD9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nup98Q6PFD9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Gm11425-201ENSMUST00000119608 498 ntBASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Gm29608-201ENSMUST00000190444 463 ntBASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Gm9396-201ENSMUST00000076703 567 ntBASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Gm10012-201ENSMUST00000078252 192 ntBASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup98Q6PFD9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup98Q6PFD9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms