Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Gm13884-201ENSMUST00000118103 829 ntBASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd3Q6P9Z1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm27300-201ENSMUST00000184085 97 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm27335-201ENSMUST00000184758 97 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm5864-201ENSMUST00000202263 970 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.19□□□□□ -0.3
Smarcd3Q6P9Z1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm2272-201ENSMUST00000194903 582 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Gm15590-201ENSMUST00000078419 552 ntBASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd3Q6P9Z1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms