Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Gm13597-201ENSMUST00000121239 375 ntBASIC12.05□□□□□ -0.48
SspnQ62147 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.05□□□□□ -0.48
SspnQ62147 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.05□□□□□ -0.48
SspnQ62147 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.05□□□□□ -0.48
SspnQ62147 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.05□□□□□ -0.48
SspnQ62147 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.05□□□□□ -0.48
SspnQ62147 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.05□□□□□ -0.48
SspnQ62147 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.05□□□□□ -0.48
SspnQ62147 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
SspnQ62147 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.05□□□□□ -0.48
SspnQ62147 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SspnQ62147 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SspnQ62147 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.04□□□□□ -0.48
SspnQ62147 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Gm13464-201ENSMUST00000119418 935 ntBASIC12.04□□□□□ -0.48
SspnQ62147 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.04□□□□□ -0.48
SspnQ62147 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.04□□□□□ -0.48
SspnQ62147 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.04□□□□□ -0.48
SspnQ62147 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.04□□□□□ -0.48
SspnQ62147 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SspnQ62147 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SspnQ62147 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SspnQ62147 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SspnQ62147 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SspnQ62147 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SspnQ62147 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms