Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.96□□□□□ -0.01
Smarcd1Q61466 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd1Q61466 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Smarcd1Q61466 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Smarcd1Q61466 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcd1Q61466 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.95□□□□□ -0.02
Smarcd1Q61466 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Gm15957-201ENSMUST00000118893 974 ntBASIC14.95□□□□□ -0.02
Smarcd1Q61466 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.95□□□□□ -0.02
Smarcd1Q61466 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcd1Q61466 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm43703-201ENSMUST00000200523 763 ntBASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd1Q61466 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.93□□□□□ -0.02
Smarcd1Q61466 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Gm6916-202ENSMUST00000205523 195 ntBASIC14.93□□□□□ -0.02
Smarcd1Q61466 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.93□□□□□ -0.02
Smarcd1Q61466 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd1Q61466 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.92□□□□□ -0.02
Smarcd1Q61466 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd1Q61466 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms