Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf20Q5DTM8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Gm4995-201ENSMUST00000117247 432 ntBASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf20Q5DTM8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf20Q5DTM8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf20Q5DTM8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf20Q5DTM8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms