Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Mir7070-201ENSMUST00000183657 86 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm6334-201ENSMUST00000207083 228 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm15782-201ENSMUST00000121073 445 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank3Q4ACU6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm18753-201ENSMUST00000201000 566 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.49■□□□□ 0.39
Shank3Q4ACU6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Gm38266-201ENSMUST00000194931 421 ntBASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shank3Q4ACU6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.48■□□□□ 0.39
Shank3Q4ACU6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm15808-201ENSMUST00000119046 604 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm26927-201ENSMUST00000182385 965 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm29396-201ENSMUST00000185659 716 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm29199-201ENSMUST00000187766 775 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm12403-201ENSMUST00000121384 959 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm13123-201ENSMUST00000122173 492 ntBASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Shank3Q4ACU6 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms