Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim43aQ3TL54 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Gm15173-201ENSMUST00000122049 433 ntBASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim43aQ3TL54 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 AW822252-206ENSMUST00000208904 237 ntBASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim43aQ3TL54 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim43aQ3TL54 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms