Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.62□□□□□ -0.39
Thbs3Q05895 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.62□□□□□ -0.39
Thbs3Q05895 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.62□□□□□ -0.39
Thbs3Q05895 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.62□□□□□ -0.39
Thbs3Q05895 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs3Q05895 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm23935-201ENSMUST00000102303 57 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm24270-201ENSMUST00000102326 57 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm24245-201ENSMUST00000157318 57 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm29310-201ENSMUST00000185468 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21825-201ENSMUST00000185728 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm29109-201ENSMUST00000185895 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21896-201ENSMUST00000186520 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21873-201ENSMUST00000186728 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21794-201ENSMUST00000187056 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21880-201ENSMUST00000187275 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21826-201ENSMUST00000187451 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21198-201ENSMUST00000188393 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21749-201ENSMUST00000189343 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21901-201ENSMUST00000189568 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm29424-201ENSMUST00000189716 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm28599-201ENSMUST00000189838 694 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21867-201ENSMUST00000189917 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm29269-201ENSMUST00000190087 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21722-201ENSMUST00000190153 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm28423-201ENSMUST00000190701 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21899-201ENSMUST00000190745 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21910-201ENSMUST00000191163 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm21849-201ENSMUST00000191571 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm28678-201ENSMUST00000191593 696 ntBASIC12.61□□□□□ -0.39
Thbs3Q05895 Gm20910-201ENSMUST00000193268 696 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms