Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.35□□□□□ -0.11
Col6a2Q02788 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.35□□□□□ -0.11
Col6a2Q02788 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Mir7684-201ENSMUST00000183858 60 ntBASIC14.34□□□□□ -0.11
Col6a2Q02788 Mir6977-201ENSMUST00000184960 64 ntBASIC14.34□□□□□ -0.11
Col6a2Q02788 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.34□□□□□ -0.11
Col6a2Q02788 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col6a2Q02788 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a2Q02788 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a2Q02788 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Col6a2Q02788 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a2Q02788 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a2Q02788 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a2Q02788 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Col6a2Q02788 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.33□□□□□ -0.12
Col6a2Q02788 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.33□□□□□ -0.12
Col6a2Q02788 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Mir125a-201ENSMUST00000083545 68 ntBASIC14.33□□□□□ -0.12
Col6a2Q02788 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.33□□□□□ -0.12
Col6a2Q02788 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a2Q02788 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a2Q02788 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col6a2Q02788 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a2Q02788 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.32□□□□□ -0.12
Col6a2Q02788 Gm15487-201ENSMUST00000122373 465 ntBASIC14.32□□□□□ -0.12
Col6a2Q02788 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.32□□□□□ -0.12
Col6a2Q02788 Gm10275-202ENSMUST00000168697 495 ntBASIC14.32□□□□□ -0.12
Col6a2Q02788 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.32□□□□□ -0.12
Col6a2Q02788 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Gm10275-201ENSMUST00000092620 635 ntBASIC14.32□□□□□ -0.12
Col6a2Q02788 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a2Q02788 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a2Q02788 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms