Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.27■□□□□ 0.2
GabpaQ00422 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GabpaQ00422 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GabpaQ00422 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GabpaQ00422 Efs-202ENSMUST00000227037 2540 ntBASIC16.26■□□□□ 0.19
GabpaQ00422 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.26■□□□□ 0.19
GabpaQ00422 Gm23984-201ENSMUST00000157139 203 ntBASIC16.26■□□□□ 0.19
GabpaQ00422 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.26■□□□□ 0.19
GabpaQ00422 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GabpaQ00422 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.26■□□□□ 0.19
GabpaQ00422 Gm18018-201ENSMUST00000198273 408 ntBASIC16.26■□□□□ 0.19
GabpaQ00422 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.26■□□□□ 0.19
GabpaQ00422 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.26■□□□□ 0.19
GabpaQ00422 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.26■□□□□ 0.19
GabpaQ00422 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.26■□□□□ 0.19
GabpaQ00422 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GabpaQ00422 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
GabpaQ00422 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GabpaQ00422 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.25■□□□□ 0.19
GabpaQ00422 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
GabpaQ00422 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GabpaQ00422 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GabpaQ00422 Gm37917-201ENSMUST00000194711 392 ntBASIC16.25■□□□□ 0.19
GabpaQ00422 Gm8515-201ENSMUST00000194852 576 ntBASIC16.25■□□□□ 0.19
GabpaQ00422 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.25■□□□□ 0.19
GabpaQ00422 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.25■□□□□ 0.19
GabpaQ00422 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.25■□□□□ 0.19
GabpaQ00422 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GabpaQ00422 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GabpaQ00422 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GabpaQ00422 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.25■□□□□ 0.19
GabpaQ00422 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.24■□□□□ 0.19
GabpaQ00422 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.24■□□□□ 0.19
GabpaQ00422 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.24■□□□□ 0.19
GabpaQ00422 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.24■□□□□ 0.19
GabpaQ00422 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.24■□□□□ 0.19
GabpaQ00422 Gm6745-201ENSMUST00000199216 526 ntBASIC16.24■□□□□ 0.19
GabpaQ00422 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Gm18624-201ENSMUST00000220966 658 ntBASIC16.24■□□□□ 0.19
GabpaQ00422 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GabpaQ00422 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.24■□□□□ 0.19
GabpaQ00422 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms