Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smn1P97801 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Smn1P97801 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smn1P97801 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smn1P97801 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Smn1P97801 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.32□□□□□ -0.44
Smn1P97801 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Smn1P97801 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.32□□□□□ -0.44
Smn1P97801 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Smn1P97801 Gm15173-201ENSMUST00000122049 433 ntBASIC12.32□□□□□ -0.44
Smn1P97801 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.32□□□□□ -0.44
Smn1P97801 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.32□□□□□ -0.44
Smn1P97801 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Smn1P97801 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.32□□□□□ -0.44
Smn1P97801 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smn1P97801 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smn1P97801 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smn1P97801 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Smn1P97801 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.31□□□□□ -0.44
Smn1P97801 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.31□□□□□ -0.44
Smn1P97801 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.31□□□□□ -0.44
Smn1P97801 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms