Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm15372-201ENSMUST00000120729 834 ntBASIC10.25□□□□□ -0.77
Rpl39P62892 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Gm9726-201ENSMUST00000180321 678 ntBASIC10.25□□□□□ -0.77
Rpl39P62892 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.25□□□□□ -0.77
Rpl39P62892 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.25□□□□□ -0.77
Rpl39P62892 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.24□□□□□ -0.77
Rpl39P62892 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Rpl39P62892 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Rpl39P62892 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.24□□□□□ -0.77
Rpl39P62892 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Rpl39P62892 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.24□□□□□ -0.77
Rpl39P62892 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Rpl39P62892 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.24□□□□□ -0.77
Rpl39P62892 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.24□□□□□ -0.77
Rpl39P62892 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.24□□□□□ -0.77
Rpl39P62892 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Rpl39P62892 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rpl39P62892 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.24□□□□□ -0.77
Rpl39P62892 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rpl39P62892 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.23□□□□□ -0.77
Rpl39P62892 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Gm12644-201ENSMUST00000119935 606 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Gm18489-201ENSMUST00000172565 551 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.23□□□□□ -0.77
Rpl39P62892 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Grk6-205ENSMUST00000224653 2976 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rpl39P62892 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms