Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm3P62311 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm3P62311 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lsm3P62311 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.09□□□□□ -0.31
Lsm3P62311 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Lsm3P62311 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.09□□□□□ -0.31
Lsm3P62311 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm3P62311 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Lsm3P62311 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Lsm3P62311 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm3P62311 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm3P62311 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm3P62311 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm3P62311 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lsm3P62311 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Gm6623-201ENSMUST00000173570 544 ntBASIC13.08□□□□□ -0.32
Lsm3P62311 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.08□□□□□ -0.32
Lsm3P62311 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.08□□□□□ -0.32
Lsm3P62311 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.08□□□□□ -0.32
Lsm3P62311 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.08□□□□□ -0.32
Lsm3P62311 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lsm3P62311 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lsm3P62311 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm3P62311 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms