Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ercc3P49135 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.06■□□□□ 0.32
Ercc3P49135 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ercc3P49135 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ercc3P49135 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.06■□□□□ 0.32
Ercc3P49135 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ercc3P49135 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ercc3P49135 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ercc3P49135 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ercc3P49135 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc3P49135 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.05■□□□□ 0.32
Ercc3P49135 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.05■□□□□ 0.32
Ercc3P49135 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.05■□□□□ 0.32
Ercc3P49135 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.05■□□□□ 0.32
Ercc3P49135 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc3P49135 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.05■□□□□ 0.32
Ercc3P49135 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ercc3P49135 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ercc3P49135 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ercc3P49135 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Ercc3P49135 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ercc3P49135 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm27618-201ENSMUST00000183671 60 ntBASIC17.04■□□□□ 0.32
Ercc3P49135 Gm9182-201ENSMUST00000217829 639 ntBASIC17.04■□□□□ 0.32
Ercc3P49135 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc3P49135 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ercc3P49135 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc3P49135 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc3P49135 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ercc3P49135 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.03■□□□□ 0.32
Ercc3P49135 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc3P49135 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms