Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Atoh1P48985 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.12■□□□□ 0.17
Atoh1P48985 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.12■□□□□ 0.17
Atoh1P48985 Gm24196-201ENSMUST00000179161 110 ntBASIC16.12■□□□□ 0.17
Atoh1P48985 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Atoh1P48985 Gm44608-201ENSMUST00000206827 855 ntBASIC16.12■□□□□ 0.17
Atoh1P48985 Gm6983-201ENSMUST00000214912 628 ntBASIC16.12■□□□□ 0.17
Atoh1P48985 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.12■□□□□ 0.17
Atoh1P48985 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Atoh1P48985 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.12■□□□□ 0.17
Atoh1P48985 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.12■□□□□ 0.17
Atoh1P48985 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.12■□□□□ 0.17
Atoh1P48985 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Atoh1P48985 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atoh1P48985 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Atoh1P48985 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.11■□□□□ 0.17
Atoh1P48985 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Atoh1P48985 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atoh1P48985 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Atoh1P48985 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Gm13385-201ENSMUST00000121089 220 ntBASIC16.11■□□□□ 0.17
Atoh1P48985 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.11■□□□□ 0.17
Atoh1P48985 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.11■□□□□ 0.17
Atoh1P48985 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.11■□□□□ 0.17
Atoh1P48985 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atoh1P48985 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atoh1P48985 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atoh1P48985 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.1■□□□□ 0.17
Atoh1P48985 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.1■□□□□ 0.17
Atoh1P48985 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm13612-201ENSMUST00000119276 390 ntBASIC16.1■□□□□ 0.17
Atoh1P48985 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.1■□□□□ 0.17
Atoh1P48985 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm24644-201ENSMUST00000157114 139 ntBASIC16.1■□□□□ 0.17
Atoh1P48985 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.1■□□□□ 0.17
Atoh1P48985 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Atoh1P48985 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.1■□□□□ 0.17
Atoh1P48985 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.1■□□□□ 0.17
Atoh1P48985 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atoh1P48985 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.1■□□□□ 0.17
Atoh1P48985 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Atoh1P48985 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Atoh1P48985 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.09■□□□□ 0.17
Atoh1P48985 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.09■□□□□ 0.17
Atoh1P48985 Gm43818-201ENSMUST00000200605 466 ntBASIC16.09■□□□□ 0.17
Atoh1P48985 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atoh1P48985 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.09■□□□□ 0.17
Atoh1P48985 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms